DNase-seq_ENCSR365FVU
DNase-seq ENCSR365FVU [biosample_summary="Homo sapiens posterior cingulate gyrus tissue male adult (78 years)"]
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| Id: | DNase-seq/ENCSR365FVU |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR365FVU [biosample_summary="Homo sapiens posterior cingulate gyrus tissue male adult (78 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (78 years) output_type: peaks audit_warning: Signal Portion of Tags (SPOT) is a measure of enrichment, analogous to the commonly used fraction of reads in peaks metric. ENCODE processed alignment files {ENCFF423ULQ|/files/ENCFF423ULQ/} processed by DNase-seq ENCODE4 v3.0.0 GRCh38 pipeline ({ENCPL848KLD|/pipelines/ENCPL848KLD/}) for GRCh38 assembly have a SPOT1 score of 0.26. According to ENCODE standards, SPOT1 score of 0.4 or higher is considered a product of high quality data. Any sample with a SPOT1 score <0.3 should be targeted for replacement with a higher quality sample, and a SPOT1 score of 0.25 is considered minimally acceptable SPOT1 score of 0.25 is considered minimally acceptable for rare and hard to find primary tissues. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR365FVU | float |
DNase-seq_ENCSR365FVU |
DNase-seq ENCSR365FVU [biosample_summary="Homo sapiens posterior cingulate gyrus tissue male adult (78 years)"]
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[0.0645, 8.83] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF358SPE.bed.gz | 886.67 KB | c90934884d2cec7876984efec39d3a76 |
| ENCFF358SPE.bed.gz.dvc | 100.0 B | bc950e45d50b92571ecda3ff100f118d |
| ENCFF358SPE.tabix.bed.gz | 817.69 KB | 80926ae0dc2fa1e0b3fa6aadbc9c265b |
| ENCFF358SPE.tabix.bed.gz.dvc | 106.0 B | cac7c2ab2f322a90481b1f637a3fcb15 |
| ENCFF358SPE.tabix.bed.gz.tbi | 255.77 KB | ef4603128c24a1192ae5e17055b3f14d |
| ENCFF358SPE.tabix.bed.gz.tbi.dvc | 110.0 B | 8a4210089e2536b22532d40ae6b16742 |
| genomic_resource.yaml | 2.07 KB | ab782a87d9d08bc06c9eef957c660ef9 |
| genomic_resource_original.yaml | 1.96 KB | 9f020d31e070e3c3c14fa108a9ce3854 |
| statistics/ |