DNase-seq_ENCSR360LBD
DNase-seq ENCSR360LBD [biosample_summary="Homo sapiens fibroblast of skin of scalp male embryo (97 days)"]
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| Id: | DNase-seq/ENCSR360LBD |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR360LBD [biosample_summary="Homo sapiens fibroblast of skin of scalp male embryo (97 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (97 days) output_type: peaks audit_warning: Alignment file {ENCFF564MVY|/files/ENCFF564MVY/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 25399050 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR360LBD | float |
DNase-seq_ENCSR360LBD |
DNase-seq ENCSR360LBD [biosample_summary="Homo sapiens fibroblast of skin of scalp male embryo (97 days)"]
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[0.198, 47.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF681CQK.bed.gz | 849.06 KB | bd1a9430890ba560c5f20d9febe7f476 |
| ENCFF681CQK.bed.gz.dvc | 100.0 B | 9424ca81fab2a33708ae224c800ba9c1 |
| ENCFF681CQK.tabix.bed.gz | 755.44 KB | 3f7ce58fa8616bee13f8a07c8ae48070 |
| ENCFF681CQK.tabix.bed.gz.dvc | 106.0 B | 5594e826ff383f17d139720e6240f78f |
| ENCFF681CQK.tabix.bed.gz.tbi | 408.83 KB | 12f514b1aeebd9d14b7061ab93fb83bb |
| ENCFF681CQK.tabix.bed.gz.tbi.dvc | 110.0 B | 8e8dc9fd5223c8659a05dd9291501fa6 |
| genomic_resource.yaml | 1.86 KB | d3458002762d40a2c159019c029bdf58 |
| genomic_resource_original.yaml | 1.75 KB | a7872e1716f8eb80623bc0de20c0677b |
| statistics/ |