DNase-seq_ENCSR357PMV
DNase-seq ENCSR357PMV [biosample_summary="Homo sapiens muscle of arm tissue female embryo (120 days)"]
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| Id: | DNase-seq/ENCSR357PMV |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR357PMV [biosample_summary="Homo sapiens muscle of arm tissue female embryo (120 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (120 days) output_type: peaks audit_warning: Alignment file {ENCFF590PWV|/files/ENCFF590PWV/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 38631803 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR357PMV | float |
DNase-seq_ENCSR357PMV |
DNase-seq ENCSR357PMV [biosample_summary="Homo sapiens muscle of arm tissue female embryo (120 days)"]
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[0.21, 29.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF623ANV.bed.gz | 651.91 KB | 666f4ff6fcfddbb7552b96c890df1863 |
| ENCFF623ANV.bed.gz.dvc | 100.0 B | 2a412efb99cacf1fa526e322d932198e |
| ENCFF623ANV.tabix.bed.gz | 582.08 KB | ca982d6effc5fd5296c9583f7706ec46 |
| ENCFF623ANV.tabix.bed.gz.dvc | 106.0 B | 2a0335a02bfad22639735a6a1acf2e70 |
| ENCFF623ANV.tabix.bed.gz.tbi | 322.17 KB | ed55c8e3561ece193fa5b5f213017132 |
| ENCFF623ANV.tabix.bed.gz.tbi.dvc | 110.0 B | 76ace16337f53be899ca46d7b59776ac |
| genomic_resource.yaml | 1.85 KB | 715ea236df604f7b7b378d766d5f6d99 |
| genomic_resource_original.yaml | 1.74 KB | 8e68ea7cae99d276676ad48e02517716 |
| statistics/ |