DNase-seq_ENCSR356RNZ
DNase-seq ENCSR356RNZ [biosample_summary="Homo sapiens heart right ventricle tissue female adult (46 years)"]
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| Id: | DNase-seq/ENCSR356RNZ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR356RNZ [biosample_summary="Homo sapiens heart right ventricle tissue female adult (46 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (46 years) output_type: peaks audit_warning: Signal Portion of Tags (SPOT) is a measure of enrichment, analogous to the commonly used fraction of reads in peaks metric. ENCODE processed alignment files {ENCFF843ZFJ|/files/ENCFF843ZFJ/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ({ENCPL848KLD|/pipelines/ENCPL848KLD/}) for GRCh38 assembly have a SPOT1 score of 0.35. According to ENCODE standards, SPOT1 score of 0.4 or higher is considered a product of high quality data. Any sample with a SPOT1 score <0.3 should be targeted for replacement with a higher quality sample, and a SPOT1 score of 0.25 is considered minimally acceptable SPOT1 score of 0.25 is considered minimally acceptable for rare and hard to find primary tissues. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR356RNZ | float |
DNase-seq_ENCSR356RNZ |
DNase-seq ENCSR356RNZ [biosample_summary="Homo sapiens heart right ventricle tissue female adult (46 years)"]
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[0.0456, 24.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF745QII.bed.gz | 1.24 MB | ce99b3d23ff8c683592d77a570beb6e6 |
| ENCFF745QII.bed.gz.dvc | 101.0 B | ba9e1335bde59273320c4626b581e1a3 |
| ENCFF745QII.tabix.bed.gz | 1.15 MB | 8d299b0cfcb98553ce5e8598aa0563bb |
| ENCFF745QII.tabix.bed.gz.dvc | 107.0 B | bf9cbe71c50149167aca378d8da2c30f |
| ENCFF745QII.tabix.bed.gz.tbi | 299.17 KB | 4873806b9d64da31ab78042e21707d62 |
| ENCFF745QII.tabix.bed.gz.tbi.dvc | 110.0 B | bfdbd6fbf7b3e1ef6cf3f6a04b77f1ab |
| genomic_resource.yaml | 2.08 KB | f3f91eecf92bd4808043a9a8b0bbebf0 |
| genomic_resource_original.yaml | 1.96 KB | 8faf4b4d7e0ee3a4526ee6182f69a745 |
| statistics/ |