DNase-seq_ENCSR332BSB
DNase-seq ENCSR332BSB [biosample_summary="Homo sapiens right kidney tissue male embryo (87 days)"]
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| Id: | DNase-seq/ENCSR332BSB |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR332BSB [biosample_summary="Homo sapiens right kidney tissue male embryo (87 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (87 days) output_type: peaks audit_warning: Alignment file {ENCFF855EOW|/files/ENCFF855EOW/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 33837312 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR332BSB | float |
DNase-seq_ENCSR332BSB |
DNase-seq ENCSR332BSB [biosample_summary="Homo sapiens right kidney tissue male embryo (87 days)"]
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[0.207, 27.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF408YVL.bed.gz | 699.26 KB | 3286dc9899a0a67c7ef5e2cd61e0cdcb |
| ENCFF408YVL.bed.gz.dvc | 100.0 B | f8d226007e9ef89ca52d32c371c68104 |
| ENCFF408YVL.tabix.bed.gz | 625.38 KB | 4544a69c67c022a04c373ed6f9dbde0f |
| ENCFF408YVL.tabix.bed.gz.dvc | 106.0 B | a9d95430f2913bf33892a8299a499883 |
| ENCFF408YVL.tabix.bed.gz.tbi | 341.78 KB | dc2b51017ceda3ff812611b030ca92d2 |
| ENCFF408YVL.tabix.bed.gz.tbi.dvc | 110.0 B | 47694d254308be431b18207c23a1b02e |
| genomic_resource.yaml | 1.83 KB | f7c797d13788c03ee9cf7ba24f3cedd7 |
| genomic_resource_original.yaml | 1.73 KB | 4fb4a7e46f294ac078dad7a3a7ab8f50 |
| statistics/ |