Resource

Id DNase-seq/ENCSR326TIDcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR326TID [biosample_summary="Homo sapiens naive B cell"]
Description
Labels
  • accession: ENCSR326TID
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000788/
  • biosample_summary: Homo sapiens naive B cell
  • date_created: 2022-02-07T22:20:21.947805+00:00
  • date_released: 2022-02-25
  • doi: 10.17989/ENCSR326TID
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR326TID float

DNase-seq_ENCSR326TID
DNase-seq ENCSR326TID [biosample_summary="Homo sapiens naive B cell"]
 HISTOGRAM FOR DNase-seq_ENCSR326TID [0.1, 51.9]
n
14,409,396
mean
4.31
sd
5.77

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 144093960.45% 70055
chr1 1379038 0.55% 6756
chr2 1068288 0.44% 5268
chr3 835954 0.42% 4055
chr4 573691 0.30% 2811
chr5 695001 0.38% 3386
chr6 920665 0.54% 4473
chr7 693948 0.44% 3369
chr8 591058 0.41% 2902
chr9 583250 0.42% 2839
chr10 627430 0.47% 3054
chr11 703760 0.52% 3440
chr12 765448 0.57% 3655
chr13 304403 0.27% 1495
chr14 484783 0.45% 2367
chr15 454358 0.45% 2224
chr16 540620 0.60% 2620
chr17 785434 0.94% 3751
chr18 278543 0.35% 1364
chr19 799150 1.36% 3726
chr20 373865 0.58% 1889
chr21 168168 0.36% 825
chr22 341991 0.67% 1664
chrX 440185 0.28% 2120
chrY 365 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 70055 1 1060 205.69 200
global segment-length histogram

Files

Filename Size md5
ENCFF677GRU.bed.gz 772.98 KB 93fbe151ce24e33c923959fbc2eb12bf
ENCFF677GRU.tabix.bed.gz 710.45 KB eea215347d0ad815cb1a9ddbd42dcd0b
ENCFF677GRU.tabix.bed.gz.tbi 295.03 KB 55c360a3e52ef5e4fae7cfe6670100d1
genomic_resource.yaml 1.09 KB 0da51ffa051907344b0b743017c1fb55
statistics/