DNase-seq_ENCSR320TUJ
DNase-seq ENCSR320TUJ [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive female adult (50 years)"]
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| Id: | DNase-seq/ENCSR320TUJ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR320TUJ [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive female adult (50 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (50 years) output_type: peaks audit_internal_action: Released analysis {ENCAN928BVS|/analyses/ENCAN928BVS/} has in progress subobject document {030ab8ce-8437-478d-812d-57f081bbb607|/documents/030ab8ce-8437-478d-812d-57f081bbb607/} audit_warning: Alignment file {ENCFF376TNQ|/files/ENCFF376TNQ/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 35839060 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR320TUJ | float |
DNase-seq_ENCSR320TUJ |
DNase-seq ENCSR320TUJ [biosample_summary="Homo sapiens common myeloid progenitor, CD34-positive female adult (50 years)"]
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[0.196, 52.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF843YAB.bed.gz | 916.0 KB | c1b7c634af641063a999e8d0fd481273 |
| ENCFF843YAB.bed.gz.dvc | 100.0 B | 2aa593b06b703cbd3718cd1e821d25ac |
| ENCFF843YAB.tabix.bed.gz | 825.42 KB | 33d004761aeb12141b913de2bbee7192 |
| ENCFF843YAB.tabix.bed.gz.dvc | 106.0 B | 61e2ac7c14870060fe179f30dcc1dc0c |
| ENCFF843YAB.tabix.bed.gz.tbi | 405.35 KB | 7c49605727712077373d658244f622c9 |
| ENCFF843YAB.tabix.bed.gz.tbi.dvc | 110.0 B | 034b5999f33cdf1ea84356a23d18bb25 |
| genomic_resource.yaml | 2.12 KB | 57b6198d4c51539bceb9acdabdcd2004 |
| genomic_resource_original.yaml | 2.0 KB | dad81e6fd662a6bde606a660fd739823 |
| statistics/ |