Resource

Id DNase-seq/ENCSR311LLZcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR311LLZ [biosample_summary="Homo sapiens heart tissue male embryo (110 days)"]
Description
Labels
  • accession: ENCSR311LLZ
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000948/
  • biosample_summary: Homo sapiens heart tissue male embryo (110 days)
  • date_created: 2015-09-16T21:42:25.867496+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR311LLZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (110 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR311LLZ float

DNase-seq_ENCSR311LLZ
DNase-seq ENCSR311LLZ [biosample_summary="Homo sapiens heart tissue male embryo (110 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR311LLZ [2, 1.92e+03]
n
14,972,389
mean
56.7
sd
53

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 149723890.47% 99371
chr1 1433497 0.58% 9522
chr2 1209475 0.50% 8030
chr3 1012396 0.51% 6716
chr4 836998 0.44% 5548
chr5 881178 0.49% 5846
chr6 938570 0.55% 6227
chr7 804792 0.51% 5339
chr8 696512 0.48% 4629
chr9 610535 0.44% 4054
chr10 728037 0.54% 4830
chr11 744449 0.55% 4936
chr12 730466 0.55% 4838
chr13 450578 0.39% 2991
chr14 438190 0.41% 2904
chr15 499149 0.49% 3317
chr16 416036 0.46% 2761
chr17 586838 0.70% 3900
chr18 356351 0.44% 2362
chr19 445063 0.76% 2958
chr20 347947 0.54% 2308
chr21 166774 0.36% 1111
chr22 249497 0.49% 1657
chrX 373461 0.24% 2483
chrY 15600 0.03% 104
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 99371 5 450 150.67 150
global segment-length histogram

Files

Filename Size md5
ENCFF871GML.bed.gz 959.88 KB 4f14009e6c68e9d8c1bc6efaf1f44edd
ENCFF871GML.tabix.bed.gz 825.63 KB 2c93a2c94fb90c708b26668ee80db8cf
ENCFF871GML.tabix.bed.gz.tbi 426.14 KB c1321e8380ff37b37c36d876f23e4037
genomic_resource.yaml 1.38 KB 3d38cb79501b8494b74b5ed172dc4d22
statistics/