DNase-seq_ENCSR305WLF
DNase-seq ENCSR305WLF [biosample_summary="Homo sapiens T-cell male adult (25 years)"]
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| Id: | DNase-seq/ENCSR305WLF |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR305WLF [biosample_summary="Homo sapiens T-cell male adult (25 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (25 years) output_type: peaks audit_warning: Alignment file {ENCFF337XYS|/files/ENCFF337XYS/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 41638042 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR305WLF | float |
DNase-seq_ENCSR305WLF |
DNase-seq ENCSR305WLF [biosample_summary="Homo sapiens T-cell male adult (25 years)"]
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[0.217, 80.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF211KOG.bed.gz | 492.92 KB | 9dd532304b88a08aa05a179c7b4376a4 |
| ENCFF211KOG.bed.gz.dvc | 100.0 B | c368a13c33a8bbbb02f94553b66cc911 |
| ENCFF211KOG.tabix.bed.gz | 446.93 KB | 939d07d3d066c99ca33d77400723b5cc |
| ENCFF211KOG.tabix.bed.gz.dvc | 106.0 B | e84b439d176533bee63fc8c42c517bc1 |
| ENCFF211KOG.tabix.bed.gz.tbi | 225.68 KB | 90f295a8c147cd03fcdd5510df885c6a |
| ENCFF211KOG.tabix.bed.gz.tbi.dvc | 110.0 B | 2b556a7ec3a4c74e14763b5d362c1ab2 |
| genomic_resource.yaml | 1.79 KB | b33959e9fc3a514a7e201e5288dc87c2 |
| genomic_resource_original.yaml | 1.7 KB | 58c1bd5d8a9b91c237d939768d013c97 |
| statistics/ |