Resource

Id DNase-seq/ENCSR305WLFcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR305WLF [biosample_summary="Homo sapiens T-cell male adult (25 years)"]
Description
Labels
  • accession: ENCSR305WLF
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000084/
  • biosample_summary: Homo sapiens T-cell male adult (25 years)
  • date_created: 2020-04-12T19:00:05.604510+00:00
  • date_released: 2020-09-25
  • doi: 10.17989/ENCSR305WLF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (25 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR305WLF float

DNase-seq_ENCSR305WLF

DNase-seq ENCSR305WLF [biosample_summary="Homo sapiens T-cell male adult (25 years)"]
HISTOGRAM FOR DNase-seq_ENCSR305WLF [0.217, 80.5]
n
7,996,659
mean
7.98
sd
10.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 79966590.25% 44229
chr1 798023 0.32% 4418
chr2 562122 0.23% 3134
chr3 438282 0.22% 2424
chr4 278085 0.15% 1535
chr5 353114 0.19% 1971
chr6 471708 0.28% 2616
chr7 369070 0.23% 2049
chr8 290930 0.20% 1628
chr9 313578 0.23% 1734
chr10 353986 0.26% 1989
chr11 411218 0.30% 2267
chr12 409387 0.31% 2265
chr13 164851 0.14% 905
chr14 282527 0.26% 1574
chr15 257987 0.25% 1434
chr16 322982 0.36% 1783
chr17 494031 0.59% 2716
chr18 127418 0.16% 726
chr19 536074 0.91% 2836
chr20 223188 0.35% 1256
chr21 97330 0.21% 537
chr22 198536 0.39% 1109
chrX 232360 0.15% 1271
chrY 9872 0.02% 52
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 44229 3 700 180.8 180
global segment-length histogram

Files

Filename Size md5
ENCFF211KOG.bed.gz 492.92 KB 9dd532304b88a08aa05a179c7b4376a4
ENCFF211KOG.tabix.bed.gz 446.93 KB 939d07d3d066c99ca33d77400723b5cc
ENCFF211KOG.tabix.bed.gz.tbi 225.68 KB 90f295a8c147cd03fcdd5510df885c6a
genomic_resource.yaml 1.79 KB b33959e9fc3a514a7e201e5288dc87c2
statistics/