DNase-seq_ENCSR303YII
DNase-seq ENCSR303YII [biosample_summary="Homo sapiens muscle of arm tissue male embryo (96 days)"]
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| Id: | DNase-seq/ENCSR303YII |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR303YII [biosample_summary="Homo sapiens muscle of arm tissue male embryo (96 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (96 days) output_type: peaks audit_warning: Alignment file {ENCFF576XTM|/files/ENCFF576XTM/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 33067811 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR303YII | float |
DNase-seq_ENCSR303YII |
DNase-seq ENCSR303YII [biosample_summary="Homo sapiens muscle of arm tissue male embryo (96 days)"]
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[0.212, 19.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF066YSB.bed.gz | 673.09 KB | 7c599f05d349d7811c1f5bee6187e0f4 |
| ENCFF066YSB.bed.gz.dvc | 100.0 B | 890c4dbf112647eff8ca0dedd6d43d52 |
| ENCFF066YSB.tabix.bed.gz | 602.5 KB | c0ac7ac4d77bec6e20c5a04079625030 |
| ENCFF066YSB.tabix.bed.gz.dvc | 106.0 B | e72ef6c05f22e79856394155cf2087a2 |
| ENCFF066YSB.tabix.bed.gz.tbi | 342.4 KB | 87ea3c843a6483e361e13036ccfb5cfc |
| ENCFF066YSB.tabix.bed.gz.tbi.dvc | 110.0 B | 00c0a7a0f1990364ef64c6400f2ecce0 |
| genomic_resource.yaml | 1.83 KB | b43252ca8bc6c58fde719d522e426ccc |
| genomic_resource_original.yaml | 1.73 KB | 1f61a6f88ea12ec50b8ddb722909c1bc |
| statistics/ |