DNase-seq_ENCSR294QCR
DNase-seq ENCSR294QCR [biosample_summary="Homo sapiens muscle of leg tissue male embryo (97 days)"]
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| Id: | DNase-seq/ENCSR294QCR |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR294QCR [biosample_summary="Homo sapiens muscle of leg tissue male embryo (97 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (97 days) output_type: peaks audit_warning: Alignment file {ENCFF288MMS|/files/ENCFF288MMS/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 28359535 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR294QCR | float |
DNase-seq_ENCSR294QCR |
DNase-seq ENCSR294QCR [biosample_summary="Homo sapiens muscle of leg tissue male embryo (97 days)"]
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[0.247, 28.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF834MZK.bed.gz | 623.48 KB | 693b607f7e1564c915b65ec5c4e079c0 |
| ENCFF834MZK.bed.gz.dvc | 100.0 B | ebfb729e12cb44a7099d6259ddf2fa4d |
| ENCFF834MZK.tabix.bed.gz | 551.79 KB | ccd339a48e1cea6486668475c9d70549 |
| ENCFF834MZK.tabix.bed.gz.dvc | 106.0 B | 8fd665fde314feb892d796f206787e40 |
| ENCFF834MZK.tabix.bed.gz.tbi | 332.28 KB | 5aa9c2ba91f141d86915edcd6362c486 |
| ENCFF834MZK.tabix.bed.gz.tbi.dvc | 110.0 B | 1a6805812e073bbbfcd860a013462218 |
| genomic_resource.yaml | 1.83 KB | 6cf90660dc20a518fb2e8825fb6ab4f3 |
| genomic_resource_original.yaml | 1.73 KB | 3407bd25ddf15a7637db7beeae840b00 |
| statistics/ |