Resource

Id DNase-seq/ENCSR286WIAcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR286WIA [biosample_summary="Homo sapiens muscle of leg tissue female embryo (105 days)"]
Description
Labels
  • accession: ENCSR286WIA
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001383/
  • biosample_summary: Homo sapiens muscle of leg tissue female embryo (105 days)
  • date_created: 2015-09-16T21:42:37.549110+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR286WIA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (105 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR286WIA float

DNase-seq_ENCSR286WIA
DNase-seq ENCSR286WIA [biosample_summary="Homo sapiens muscle of leg tissue female embryo (105 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR286WIA [0.235, 27.6]
n
12,328,893
mean
2.94
sd
3.08

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 123288930.38% 67412
chr1 1118082 0.45% 6066
chr2 992471 0.41% 5468
chr3 804525 0.41% 4452
chr4 637740 0.34% 3532
chr5 704753 0.39% 3864
chr6 762953 0.45% 4146
chr7 630477 0.40% 3482
chr8 601591 0.41% 3260
chr9 521780 0.38% 2824
chr10 587649 0.44% 3238
chr11 633604 0.47% 3452
chr12 610808 0.46% 3316
chr13 356003 0.31% 1971
chr14 392623 0.37% 2147
chr15 387276 0.38% 2133
chr16 379734 0.42% 2070
chr17 483935 0.58% 2628
chr18 268818 0.33% 1499
chr19 461809 0.79% 2360
chr20 300534 0.47% 1650
chr21 145249 0.31% 808
chr22 198602 0.39% 1112
chrX 337481 0.22% 1871
chrY 10396 0.02% 63
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 67412 3 900 182.89 180
global segment-length histogram

Files

Filename Size md5
ENCFF761BTV.bed.gz 715.9 KB 192e5b7c6c57c0a78836fb1b6d2788fc
ENCFF761BTV.tabix.bed.gz 640.37 KB fde7f15c822a53f3781230ca873387d6
ENCFF761BTV.tabix.bed.gz.tbi 363.55 KB 00977727e8388c84fe45c90539be98a3
genomic_resource.yaml 1.85 KB 00303b86f2b15871788332a137006959
statistics/