Resource
| Id | DNase-seq/ENCSR279SXQ |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR279SXQ [biosample_summary="Homo sapiens left colon tissue female adult (46 years)"] |
| Description |
status: released biological_replicates: Rep 1 summary: female adult (46 years) output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR279SXQ | float |
DNase-seq_ENCSR279SXQ |
DNase-seq ENCSR279SXQ [biosample_summary="Homo sapiens left colon tissue female adult (46 years)"]
|
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[0.0543, 54.1] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 22644640 | 0.70% | 119662 |
| chr1 | 2231219 | 0.90% | 11725 |
| chr2 | 1698598 | 0.70% | 9055 |
| chr3 | 1209356 | 0.61% | 6522 |
| chr4 | 857251 | 0.45% | 4583 |
| chr5 | 1011077 | 0.56% | 5430 |
| chr6 | 1168704 | 0.68% | 6281 |
| chr7 | 1145487 | 0.72% | 6064 |
| chr8 | 910669 | 0.63% | 4895 |
| chr9 | 1006852 | 0.73% | 5302 |
| chr10 | 1059013 | 0.79% | 5620 |
| chr11 | 1291426 | 0.96% | 6691 |
| chr12 | 1022997 | 0.77% | 5447 |
| chr13 | 446891 | 0.39% | 2407 |
| chr14 | 784751 | 0.73% | 4114 |
| chr15 | 759864 | 0.75% | 4022 |
| chr16 | 957739 | 1.06% | 4995 |
| chr17 | 1319726 | 1.59% | 6776 |
| chr18 | 436609 | 0.54% | 2341 |
| chr19 | 1246283 | 2.13% | 6323 |
| chr20 | 657243 | 1.02% | 3532 |
| chr21 | 301725 | 0.65% | 1605 |
| chr22 | 565148 | 1.11% | 2947 |
| chrX | 555892 | 0.36% | 2984 |
| chrY | 120 | <0.01% | 1 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 119662 | 1 | 980 | 189.24 | 180 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF042YMQ.bed.gz | 1.29 MB | 23a35cc10d17f2bce743540a26b480a4 |
| ENCFF042YMQ.tabix.bed.gz | 1.18 MB | a901748ae2dd501daf31a0826afcd1cc |
| ENCFF042YMQ.tabix.bed.gz.tbi | 401.14 KB | b8c1bcf94ab973ff516cd04ebd1ca669 |
| genomic_resource.yaml | 1.22 KB | ef8fea48e401b1537fadcf03425fe544 |
| statistics/ |
