Resource

Id DNase-seq/ENCSR278SKGcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR278SKG [biosample_summary="Homo sapiens right atrium auricular region tissue female adult (51 years)"]
Description
Labels
  • accession: ENCSR278SKG
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006631/
  • biosample_summary: Homo sapiens right atrium auricular region tissue female adult (51 years)
  • date_created: 2016-12-28T18:59:36.742060+00:00
  • date_released: 2017-10-01
  • doi: 10.17989/ENCSR278SKG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR278SKG float

DNase-seq_ENCSR278SKG
DNase-seq ENCSR278SKG [biosample_summary="Homo sapiens right atrium auricular region tissue female adult (51 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR278SKG [1, 1.25e+04]
n
59,166,336
mean
54
sd
56.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 591663361.84% 392873
chr1 4965736 1.99% 32971
chr2 5570471 2.30% 36966
chr3 3259015 1.64% 21642
chr4 2114023 1.11% 14047
chr5 3106472 1.71% 20620
chr6 3086440 1.81% 20497
chr7 2981355 1.87% 19805
chr8 2969426 2.05% 19717
chr9 2391766 1.73% 15899
chr10 3941061 2.95% 26181
chr11 2826658 2.09% 18776
chr12 2278615 1.71% 15144
chr13 1557341 1.36% 10347
chr14 1814353 1.69% 12058
chr15 2248583 2.20% 14925
chr16 2230388 2.47% 14825
chr17 1936364 2.33% 12858
chr18 2003950 2.49% 13296
chr19 1531969 2.61% 10167
chr20 1979838 3.07% 13136
chr21 966324 2.07% 6409
chr22 1232880 2.43% 8180
chrX 2121258 1.36% 14061
chrY 52050 0.09% 346
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 392873 2 450 150.6 150
global segment-length histogram

Files

Filename Size md5
ENCFF918YIN.bed.gz 3.47 MB a030f5ee45ac85ce248fd0faf8c409f2
ENCFF918YIN.tabix.bed.gz 2.98 MB 4ef7499e2a009810a671694f382d87a5
ENCFF918YIN.tabix.bed.gz.tbi 484.86 KB 9a268acf50cf31dc2fb6a2ec0a9856a2
genomic_resource.yaml 1.46 KB 6d000683aacffda5198471c8f8418d30
statistics/