Resource

Id DNase-seq/ENCSR270LZEcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR270LZE [biosample_summary="Homo sapiens muscle of arm tissue male embryo (113 days)"]
Description
Labels
  • accession: ENCSR270LZE
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001499/
  • biosample_summary: Homo sapiens muscle of arm tissue male embryo (113 days)
  • date_created: 2015-09-16T21:42:39.426325+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR270LZE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (113 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR270LZE float

DNase-seq_ENCSR270LZE

DNase-seq ENCSR270LZE [biosample_summary="Homo sapiens muscle of arm tissue male embryo (113 days)"]
HISTOGRAM FOR DNase-seq_ENCSR270LZE [3, 1.24e+03]
n
8,535,383
mean
34.7
sd
27.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 85353830.27% 56546
chr1 765529 0.31% 5080
chr2 684433 0.28% 4530
chr3 568663 0.29% 3765
chr4 447774 0.24% 2965
chr5 498637 0.27% 3307
chr6 540442 0.32% 3572
chr7 423180 0.27% 2794
chr8 390688 0.27% 2595
chr9 356259 0.26% 2363
chr10 401421 0.30% 2665
chr11 451773 0.33% 2987
chr12 424185 0.32% 2808
chr13 240445 0.21% 1584
chr14 279574 0.26% 1852
chr15 271175 0.27% 1801
chr16 264416 0.29% 1755
chr17 342917 0.41% 2276
chr18 188659 0.23% 1253
chr19 317250 0.54% 2102
chr20 218730 0.34% 1450
chr21 94234 0.20% 624
chr22 139050 0.27% 924
chrX 216580 0.14% 1431
chrY 9369 0.02% 63
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 56546 17 600 150.95 150
global segment-length histogram

Files

Filename Size md5
ENCFF523TKA.bed.gz 546.53 KB 094646d97e9aef6f158a613aea7f0db6
ENCFF523TKA.tabix.bed.gz 468.44 KB 8bf3ce7d50c6a25cf53601a5d30414e8
ENCFF523TKA.tabix.bed.gz.tbi 302.46 KB 68a6649bcfc401ecf1c8e3669f1c28a7
genomic_resource.yaml 1.4 KB 87ac3fcd801e6c8725d4386946c13c35
statistics/