DNase-seq_ENCSR268QCH
DNase-seq ENCSR268QCH [biosample_summary="Homo sapiens right renal cortex interstitium tissue male embryo (105 days)"]
×
| Id: | DNase-seq/ENCSR268QCH |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR268QCH [biosample_summary="Homo sapiens right renal cortex interstitium tissue male embryo (105 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (105 days) output_type: peaks audit_warning: Alignment file {ENCFF998MJG|/files/ENCFF998MJG/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 28134093 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR268QCH | float |
DNase-seq_ENCSR268QCH |
DNase-seq ENCSR268QCH [biosample_summary="Homo sapiens right renal cortex interstitium tissue male embryo (105 days)"]
|
|
[0.214, 19.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF324SRM.bed.gz | 534.05 KB | d2c7ee8ac2755749d89297259fb74291 |
| ENCFF324SRM.bed.gz.dvc | 100.0 B | 07279419fcbb976ec3e4a461b743d9b0 |
| ENCFF324SRM.tabix.bed.gz | 476.55 KB | 2563d4f76d25d1422b0391341f3a9cf7 |
| ENCFF324SRM.tabix.bed.gz.dvc | 106.0 B | cab4e33a9e02c800c794c6ca4cf51450 |
| ENCFF324SRM.tabix.bed.gz.tbi | 278.4 KB | da28a57b9969ef102bb75884c333fafc |
| ENCFF324SRM.tabix.bed.gz.tbi.dvc | 110.0 B | 91b08a1d478295e8082d7b643000233c |
| genomic_resource.yaml | 1.9 KB | 2d29198b3e3405f3f914df3ddc684821 |
| genomic_resource_original.yaml | 1.78 KB | db7fb01ff34ec2a0430b4f4b4bc99e13 |
| statistics/ |