DNase-seq_ENCSR263IGU
DNase-seq ENCSR263IGU [biosample_summary="Homo sapiens right lung tissue female embryo (91 days)"]
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| Id: | DNase-seq/ENCSR263IGU |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR263IGU [biosample_summary="Homo sapiens right lung tissue female embryo (91 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (91 days) output_type: peaks audit_warning: Alignment file {ENCFF399JGM|/files/ENCFF399JGM/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 37691292 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR263IGU | float |
DNase-seq_ENCSR263IGU |
DNase-seq ENCSR263IGU [biosample_summary="Homo sapiens right lung tissue female embryo (91 days)"]
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[0.186, 20.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF685KAU.bed.gz | 796.29 KB | 2108e37efa8728a6a7e466a00782801e |
| ENCFF685KAU.bed.gz.dvc | 100.0 B | 2701651125974ff0b71f6bfe83db500e |
| ENCFF685KAU.tabix.bed.gz | 720.08 KB | 5f1bec90483825266765551e8880e11a |
| ENCFF685KAU.tabix.bed.gz.dvc | 106.0 B | 8a1253228eca5f7fb6b8aa1a74d8bf36 |
| ENCFF685KAU.tabix.bed.gz.tbi | 375.74 KB | 2b5b40925307ed95ed7a4a470c836add |
| ENCFF685KAU.tabix.bed.gz.tbi.dvc | 110.0 B | 137f9ddb5c7465da141696a30452f2fa |
| genomic_resource.yaml | 1.83 KB | 8222c6147cc4c856c53bc5de19bd82d9 |
| genomic_resource_original.yaml | 1.73 KB | ba6d10a65057a4c433463ec80cb0fa3c |
| statistics/ |