DNase-seq_ENCSR254BCA
DNase-seq ENCSR254BCA [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)"]
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| Id: | DNase-seq/ENCSR254BCA |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR254BCA [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (33 years) output_type: peaks audit_warning: Alignment file {ENCFF466QWH|/files/ENCFF466QWH/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 28639136 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR254BCA | float |
DNase-seq_ENCSR254BCA |
DNase-seq ENCSR254BCA [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)"]
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[0.35, 103] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF654XQL.bed.gz | 431.38 KB | 62f0e6b21bf1cf0c79f56d2c54f13e6f |
| ENCFF654XQL.bed.gz.dvc | 100.0 B | cfc2837ea4a4af269e1933b1dd129e09 |
| ENCFF654XQL.tabix.bed.gz | 390.57 KB | a1c9d0628df4ec4748fbc77939464e5e |
| ENCFF654XQL.tabix.bed.gz.dvc | 106.0 B | ab87c513e15b53b9fa517c9a20c8edb8 |
| ENCFF654XQL.tabix.bed.gz.tbi | 204.45 KB | 7520d624699c6752bcd2384126c9d8a7 |
| ENCFF654XQL.tabix.bed.gz.tbi.dvc | 110.0 B | 492401b2568ee3b82af77c2005525627 |
| genomic_resource.yaml | 1.88 KB | 59f52565150b59cde8e27d0bd54ad98e |
| genomic_resource_original.yaml | 1.77 KB | 4d56696d7d24b77be927d00763550184 |
| statistics/ |