DNase-seq_ENCSR235OZX
DNase-seq ENCSR235OZX [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)"]
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| Id: | DNase-seq/ENCSR235OZX |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR235OZX [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (33 years) output_type: peaks audit_error: Alignment file {ENCFF889DNV|/files/ENCFF889DNV/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 14537068 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR235OZX | float |
DNase-seq_ENCSR235OZX |
DNase-seq ENCSR235OZX [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)"]
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[0.551, 80.8] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF615CMQ.bed.gz | 332.55 KB | d737c37a7f8defd1dc561b3d1154649c |
| ENCFF615CMQ.bed.gz.dvc | 100.0 B | aca5e44d636153db4cf9fcc829f07784 |
| ENCFF615CMQ.tabix.bed.gz | 298.65 KB | 0eaa6b5a041df2040610198f97e75162 |
| ENCFF615CMQ.tabix.bed.gz.dvc | 106.0 B | 8bb6b55fa306d00a47c95211b1485d28 |
| ENCFF615CMQ.tabix.bed.gz.tbi | 174.54 KB | e926e42d07772ae95b066dfa52fed49c |
| ENCFF615CMQ.tabix.bed.gz.tbi.dvc | 110.0 B | 73d96f998a50b12e949b4eb6b527bb6a |
| genomic_resource.yaml | 1.88 KB | 914151a2a03eda7074bb55ff9efe5aec |
| genomic_resource_original.yaml | 1.77 KB | 49a7896b342ca541b07b99154525be38 |
| statistics/ |