DNase-seq_ENCSR217YRJ
DNase-seq ENCSR217YRJ [biosample_summary="Homo sapiens muscle of trunk tissue female embryo (120 days)"]
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| Id: | DNase-seq/ENCSR217YRJ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR217YRJ [biosample_summary="Homo sapiens muscle of trunk tissue female embryo (120 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (120 days) output_type: peaks audit_warning: Alignment file {ENCFF057YLB|/files/ENCFF057YLB/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 30057126 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR217YRJ | float |
DNase-seq_ENCSR217YRJ |
DNase-seq ENCSR217YRJ [biosample_summary="Homo sapiens muscle of trunk tissue female embryo (120 days)"]
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[0.233, 39.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF289RTF.bed.gz | 715.26 KB | 2f1c7c4aec7595a74f4cdeb4b144ff50 |
| ENCFF289RTF.bed.gz.dvc | 100.0 B | 80d4d9deb6320d0f54cb2d2ed61dfa2e |
| ENCFF289RTF.tabix.bed.gz | 635.92 KB | 929e22e9a45e72c2a1a121b631e4b6e2 |
| ENCFF289RTF.tabix.bed.gz.dvc | 106.0 B | 8d1cd8698b91ccda810777d76f34aa69 |
| ENCFF289RTF.tabix.bed.gz.tbi | 363.38 KB | aab1e2325c8e4f809df44cbb67b7cb9a |
| ENCFF289RTF.tabix.bed.gz.tbi.dvc | 110.0 B | be73bd3ffc5b3b2ccea3eff4f3bdf2f8 |
| genomic_resource.yaml | 1.85 KB | c4a531b9e6f3a82ed796f1497281f564 |
| genomic_resource_original.yaml | 1.75 KB | 8459e9ff9341dbb0d2ed417bee2a10af |
| statistics/ |