DNase-seq_ENCSR217PZP
DNase-seq ENCSR217PZP [biosample_summary="Homo sapiens T-cell male adult (26 years)"]
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| Id: | DNase-seq/ENCSR217PZP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR217PZP [biosample_summary="Homo sapiens T-cell male adult (26 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (26 years) output_type: peaks audit_warning: Alignment file {ENCFF906TNE|/files/ENCFF906TNE/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 39629972 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR217PZP | float |
DNase-seq_ENCSR217PZP |
DNase-seq ENCSR217PZP [biosample_summary="Homo sapiens T-cell male adult (26 years)"]
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[0.304, 93.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF156CAM.bed.gz | 512.54 KB | 5e0d47eaf260c0faf463c0535333b9fb |
| ENCFF156CAM.bed.gz.dvc | 100.0 B | d4ed1bc20fb6040acd0a08eaf4c37757 |
| ENCFF156CAM.tabix.bed.gz | 464.36 KB | cd3e06714b418c8721e23d36ab066018 |
| ENCFF156CAM.tabix.bed.gz.dvc | 106.0 B | 9698cb40b41132851fbefa7b3635a651 |
| ENCFF156CAM.tabix.bed.gz.tbi | 233.18 KB | d8d75bd61f4e9ca0b65f57fde0e6dba1 |
| ENCFF156CAM.tabix.bed.gz.tbi.dvc | 110.0 B | 62671354d0a3f24ac72da3815b01d44f |
| genomic_resource.yaml | 1.79 KB | 208d77b5dbc8ce5cb4bcd43cee37bb36 |
| genomic_resource_original.yaml | 1.7 KB | 4746ca0d70e50689ee6dc9f0abe81ed4 |
| statistics/ |