Resource
| Id | DNase-seq/ENCSR215DXT |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR215DXT [biosample_summary="Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)"] |
| Description |
status: released biological_replicates: Rep 1 summary: female adult (90 or above years) with Cognitive impairment output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR215DXT | float |
DNase-seq_ENCSR215DXT |
DNase-seq ENCSR215DXT [biosample_summary="Homo sapiens with Cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)"]
|
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[0.103, 23.9] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 8834063 | 0.27% | 47163 |
| chr1 | 835574 | 0.34% | 4452 |
| chr2 | 627836 | 0.26% | 3418 |
| chr3 | 432014 | 0.22% | 2305 |
| chr4 | 331164 | 0.17% | 1781 |
| chr5 | 391627 | 0.22% | 2130 |
| chr6 | 396527 | 0.23% | 2096 |
| chr7 | 422161 | 0.26% | 2266 |
| chr8 | 419396 | 0.29% | 2242 |
| chr9 | 408862 | 0.30% | 2203 |
| chr10 | 433916 | 0.32% | 2349 |
| chr11 | 549484 | 0.41% | 2927 |
| chr12 | 407957 | 0.31% | 2168 |
| chr13 | 173156 | 0.15% | 900 |
| chr14 | 289565 | 0.27% | 1534 |
| chr15 | 277023 | 0.27% | 1497 |
| chr16 | 334148 | 0.37% | 1784 |
| chr17 | 504249 | 0.61% | 2679 |
| chr18 | 170512 | 0.21% | 901 |
| chr19 | 508079 | 0.87% | 2618 |
| chr20 | 274247 | 0.43% | 1490 |
| chr21 | 137600 | 0.29% | 714 |
| chr22 | 310887 | 0.61% | 1642 |
| chrX | 197316 | 0.13% | 1061 |
| chrY | 763 | <0.01% | 6 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 47163 | 1 | 840 | 187.31 | 180 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF436TTP.bed.gz | 516.99 KB | 8a49731c97f815e7c1b33e45802830a4 |
| ENCFF436TTP.tabix.bed.gz | 472.83 KB | c6d87f68483cac3c5b1423d1792681f2 |
| ENCFF436TTP.tabix.bed.gz.tbi | 210.16 KB | 5e9a6ee139e54cd4ded62f9bcf220c0c |
| genomic_resource.yaml | 1.46 KB | 1fd4572a2a711876475793fc1c77e369 |
| statistics/ |
