Resource

Id DNase-seq/ENCSR214NLQcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR214NLQ [biosample_summary="Homo sapiens heart right ventricle tissue male adult (69 years)"]
Description
Labels
  • accession: ENCSR214NLQ
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue male adult (69 years)
  • date_created: 2019-09-12T18:22:18.067978+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR214NLQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (69 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR214NLQ float

DNase-seq_ENCSR214NLQ
DNase-seq ENCSR214NLQ [biosample_summary="Homo sapiens heart right ventricle tissue male adult (69 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR214NLQ [0.0517, 29]
n
19,242,212
mean
1.83
sd
2.29

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 192422120.60% 102240
chr1 1837031 0.74% 9717
chr2 1519906 0.63% 8167
chr3 1161973 0.59% 6231
chr4 697690 0.37% 3807
chr5 1016768 0.56% 5421
chr6 1016288 0.59% 5469
chr7 873017 0.55% 4742
chr8 781468 0.54% 4241
chr9 860645 0.62% 4574
chr10 987757 0.74% 5276
chr11 1080840 0.80% 5640
chr12 874929 0.66% 4629
chr13 422619 0.37% 2292
chr14 635891 0.59% 3338
chr15 708303 0.69% 3785
chr16 734375 0.81% 3847
chr17 1005834 1.21% 5149
chr18 363719 0.45% 2020
chr19 899258 1.53% 4441
chr20 570604 0.89% 3056
chr21 239767 0.51% 1282
chr22 449462 0.88% 2380
chrX 485950 0.31% 2636
chrY 18118 0.03% 100
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 102240 2 960 188.21 180
global segment-length histogram

Files

Filename Size md5
ENCFF038ZBF.bed.gz 1.09 MB bdd8150dd43dd9b24b4a9594cf4236c8
ENCFF038ZBF.tabix.bed.gz 1019.28 KB bcab440ce4e138c1727f399d9ba2aa9a
ENCFF038ZBF.tabix.bed.gz.tbi 387.65 KB 234a81ca1a81d8d071191219396fa85b
genomic_resource.yaml 2.48 KB 01f0f4360470bf9c218f5341f8cc9517
statistics/