Resource

Id DNase-seq/ENCSR213WNVcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR213WNV [biosample_summary="Homo sapiens T-cell male adult (38 years)"]
Description
Labels
  • accession: ENCSR213WNV
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000084/
  • biosample_summary: Homo sapiens T-cell male adult (38 years)
  • date_created: 2020-04-19T18:36:50.461635+00:00
  • date_released: 2020-10-02
  • doi: 10.17989/ENCSR213WNV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (38 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR213WNV float

DNase-seq_ENCSR213WNV
DNase-seq ENCSR213WNV [biosample_summary="Homo sapiens T-cell male adult (38 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR213WNV [0.151, 34.4]
n
7,752,924
mean
4.35
sd
4.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 77529240.24% 37670
chr1 792434 0.32% 3821
chr2 527441 0.22% 2549
chr3 412533 0.21% 1998
chr4 261525 0.14% 1252
chr5 333835 0.18% 1627
chr6 445095 0.26% 2121
chr7 358486 0.22% 1758
chr8 276903 0.19% 1360
chr9 310376 0.22% 1533
chr10 339707 0.25% 1671
chr11 400147 0.30% 1966
chr12 396956 0.30% 1903
chr13 159290 0.14% 740
chr14 279161 0.26% 1326
chr15 254505 0.25% 1267
chr16 323191 0.36% 1586
chr17 489491 0.59% 2405
chr18 113382 0.14% 554
chr19 543530 0.93% 2590
chr20 216299 0.34% 1089
chr21 93706 0.20% 472
chr22 190179 0.37% 947
chrX 225200 0.14% 1098
chrY 9552 0.02% 37
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 37670 1 800 205.81 200
global segment-length histogram

Files

Filename Size md5
ENCFF313QBH.bed.gz 415.69 KB 8e87e0e1b42ade1f12fff866a48ef8a5
ENCFF313QBH.tabix.bed.gz 379.52 KB eaeeba8aabf72f6813f9d9c7945da03b
ENCFF313QBH.tabix.bed.gz.tbi 196.96 KB 986f5ab347bfd5b48c2693a43bd5b5e7
genomic_resource.yaml 2.0 KB d3da3a7b8db539d861aac5e871e1e7ac
statistics/