Resource

Id DNase-seq/ENCSR211SUTcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR211SUT [biosample_summary="Homo sapiens heart right ventricle tissue male adult (55 years)"]
Description
Labels
  • accession: ENCSR211SUT
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue male adult (55 years)
  • date_created: 2019-09-12T18:22:17.615867+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR211SUT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (55 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR211SUT float

DNase-seq_ENCSR211SUT
DNase-seq ENCSR211SUT [biosample_summary="Homo sapiens heart right ventricle tissue male adult (55 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR211SUT [0.0441, 22.8]
n
16,543,977
mean
1.4
sd
1.64

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 165439770.51% 88786
chr1 1581406 0.64% 8423
chr2 1327140 0.55% 7217
chr3 1016228 0.51% 5467
chr4 567453 0.30% 3122
chr5 848911 0.47% 4576
chr6 849850 0.50% 4594
chr7 760604 0.48% 4152
chr8 695464 0.48% 3756
chr9 704916 0.51% 3797
chr10 926384 0.69% 5024
chr11 902662 0.67% 4790
chr12 736503 0.55% 3910
chr13 368728 0.32% 2020
chr14 500766 0.47% 2712
chr15 631406 0.62% 3375
chr16 592190 0.66% 3183
chr17 839382 1.01% 4397
chr18 309653 0.39% 1731
chr19 831257 1.42% 4189
chr20 495918 0.77% 2678
chr21 235740 0.50% 1257
chr22 414689 0.82% 2207
chrX 390032 0.25% 2116
chrY 16695 0.03% 93
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 88786 3 820 186.34 180
global segment-length histogram

Files

Filename Size md5
ENCFF857HDH.bed.gz 971.63 KB 00a65d5c80deadb873c30c300c829654
ENCFF857HDH.tabix.bed.gz 887.92 KB 6bb55c46474b43c805723b3473c4455e
ENCFF857HDH.tabix.bed.gz.tbi 336.94 KB 557708cc78ea0959e93b939e1a3488ce
genomic_resource.yaml 2.06 KB bc10736a7f816ba1fd09191ba3533116
statistics/