Resource

Id DNase-seq/ENCSR195GUKcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR195GUK [biosample_summary="Homo sapiens posterior cingulate gyrus tissue male adult (82 years)"]
Description
Labels
  • accession: ENCSR195GUK
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002740/
  • biosample_summary: Homo sapiens posterior cingulate gyrus tissue male adult (82 years)
  • date_created: 2020-11-04T06:14:32.212355+00:00
  • date_released: 2021-01-12
  • doi: 10.17989/ENCSR195GUK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (82 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR195GUK float

DNase-seq_ENCSR195GUK
DNase-seq ENCSR195GUK [biosample_summary="Homo sapiens posterior cingulate gyrus tissue male adult (82 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR195GUK [0.0766, 30]
n
14,887,272
mean
3.12
sd
3.61

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 148872720.46% 78926
chr1 1395940 0.56% 7409
chr2 1164471 0.48% 6187
chr3 849213 0.43% 4492
chr4 585268 0.31% 3102
chr5 716036 0.39% 3865
chr6 753170 0.44% 3970
chr7 744039 0.47% 3926
chr8 649180 0.45% 3509
chr9 702761 0.51% 3691
chr10 733916 0.55% 3917
chr11 833769 0.62% 4461
chr12 699550 0.52% 3653
chr13 330022 0.29% 1727
chr14 509292 0.48% 2662
chr15 476131 0.47% 2548
chr16 530290 0.59% 2846
chr17 761260 0.91% 4017
chr18 329819 0.41% 1750
chr19 714401 1.22% 3659
chr20 437585 0.68% 2356
chr21 185125 0.40% 994
chr22 371556 0.73% 1970
chrX 398590 0.26% 2121
chrY 15888 0.03% 94
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 78926 4 1000 188.62 180
global segment-length histogram

Files

Filename Size md5
ENCFF092MVE.bed.gz 880.57 KB c6d5c24fef7a5d46496651250adb7205
ENCFF092MVE.tabix.bed.gz 804.34 KB 33dd00d2d77fac6680c8e90404d3c79a
ENCFF092MVE.tabix.bed.gz.tbi 325.87 KB 8e62a4d9a18ef80a1d9aec8712a4d881
genomic_resource.yaml 1.26 KB 00d09f2b9cf4d0091418925ddfc04cdb
statistics/