DNase-seq_ENCSR187PYY
DNase-seq ENCSR187PYY [biosample_summary="Homo sapiens brain tissue female embryo (142 days)"]
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| Id: | DNase-seq/ENCSR187PYY |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR187PYY [biosample_summary="Homo sapiens brain tissue female embryo (142 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (142 days) output_type: peaks audit_warning: Alignment file {ENCFF926JEK|/files/ENCFF926JEK/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 34122520 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR187PYY | float |
DNase-seq_ENCSR187PYY |
DNase-seq ENCSR187PYY [biosample_summary="Homo sapiens brain tissue female embryo (142 days)"]
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[0.206, 17.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF572DGX.bed.gz | 553.94 KB | b1c7a01cbcdca9fd5499e81d4a3c195f |
| ENCFF572DGX.bed.gz.dvc | 100.0 B | 3ed08436060a8df726321e5582ed7483 |
| ENCFF572DGX.tabix.bed.gz | 500.88 KB | 3011e73794885944a30582b842325b60 |
| ENCFF572DGX.tabix.bed.gz.dvc | 106.0 B | e5eb28726137e3ab0f6fde6a18025490 |
| ENCFF572DGX.tabix.bed.gz.tbi | 292.73 KB | 5647ec09f01c7c7e00c26b87246dd8ec |
| ENCFF572DGX.tabix.bed.gz.tbi.dvc | 110.0 B | f159c9f0066e272c68a11639c12bc93e |
| genomic_resource.yaml | 1.82 KB | fbcdcee022b0736d39a943bcb442e4c8 |
| genomic_resource_original.yaml | 1.73 KB | a64761972a5b6192a4b4757d0fe15864 |
| statistics/ |