DNase-seq_ENCSR174GXG
DNase-seq ENCSR174GXG [biosample_summary="Homo sapiens muscle of back tissue male embryo (101 days)"]
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| Id: | DNase-seq/ENCSR174GXG |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR174GXG [biosample_summary="Homo sapiens muscle of back tissue male embryo (101 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (101 days) output_type: peaks audit_warning: Alignment file {ENCFF773QTX|/files/ENCFF773QTX/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 28136552 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR174GXG | float |
DNase-seq_ENCSR174GXG |
DNase-seq ENCSR174GXG [biosample_summary="Homo sapiens muscle of back tissue male embryo (101 days)"]
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[0.214, 17.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF897ZNB.bed.gz | 565.48 KB | 5003f6c96ae41b0e6ee50593a6eb054b |
| ENCFF897ZNB.bed.gz.dvc | 100.0 B | fa0812970392fa7c018de2e60753a267 |
| ENCFF897ZNB.tabix.bed.gz | 505.78 KB | e1bb018c9c582e81cf7537e73fa2bd50 |
| ENCFF897ZNB.tabix.bed.gz.dvc | 106.0 B | 26c7d9492ff00a64d34822e2fc7bb1eb |
| ENCFF897ZNB.tabix.bed.gz.tbi | 296.61 KB | 49aa739f10b951bdc2a00a75a16416ad |
| ENCFF897ZNB.tabix.bed.gz.tbi.dvc | 110.0 B | 9494108c54f0ed67b278d520977a28b4 |
| genomic_resource.yaml | 1.84 KB | 5ca0a00b428448710c6973eea5e22227 |
| genomic_resource_original.yaml | 1.74 KB | eb8058dad29478eb168a2891249c3e99 |
| statistics/ |