DNase-seq_ENCSR167XSQ
DNase-seq ENCSR167XSQ [biosample_summary="Homo sapiens muscle of leg tissue male embryo (101 days)"]
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| Id: | DNase-seq/ENCSR167XSQ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR167XSQ [biosample_summary="Homo sapiens muscle of leg tissue male embryo (101 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (101 days) output_type: peaks audit_warning: Alignment file {ENCFF276CFK|/files/ENCFF276CFK/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 37255514 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR167XSQ | float |
DNase-seq_ENCSR167XSQ |
DNase-seq ENCSR167XSQ [biosample_summary="Homo sapiens muscle of leg tissue male embryo (101 days)"]
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[0.188, 22.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF718OIX.bed.gz | 807.79 KB | 34fb6f7cd31fdc035cc65b194fbb89b4 |
| ENCFF718OIX.bed.gz.dvc | 100.0 B | 96b00f0ed854531333d3a66633ae1598 |
| ENCFF718OIX.tabix.bed.gz | 724.35 KB | 7ac145932aaacf0b07a545a8296d9233 |
| ENCFF718OIX.tabix.bed.gz.dvc | 106.0 B | fecf009ecd78fd9518599a3d16d8d136 |
| ENCFF718OIX.tabix.bed.gz.tbi | 389.22 KB | b8bfd59be650ab51689b5fbdddb78624 |
| ENCFF718OIX.tabix.bed.gz.tbi.dvc | 110.0 B | 6646d04255e879d46b3a4c10f8203249 |
| genomic_resource.yaml | 1.84 KB | 4b466eb4e0ce1c0b4ef795774c319ff2 |
| genomic_resource_original.yaml | 1.74 KB | 1bc354e814581444d99b7e886b6d58d0 |
| statistics/ |