DNase-seq_ENCSR162JNV
DNase-seq ENCSR162JNV [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)"]
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| Id: | DNase-seq/ENCSR162JNV |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR162JNV [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (38 years) output_type: peaks audit_warning: Alignment file {ENCFF898KQX|/files/ENCFF898KQX/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 31395992 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR162JNV | float |
DNase-seq_ENCSR162JNV |
DNase-seq ENCSR162JNV [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)"]
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[0.415, 44.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF017FZE.bed.gz | 379.87 KB | 8abcd16f948d56a537296a37a26bd987 |
| ENCFF017FZE.bed.gz.dvc | 100.0 B | 81f68f9df34aec978c8cd33fa302b6a1 |
| ENCFF017FZE.tabix.bed.gz | 344.05 KB | db98e5a93a13f430b6825fdc8c0a4049 |
| ENCFF017FZE.tabix.bed.gz.dvc | 106.0 B | 13fdc53eb081aace48eb69a328990d67 |
| ENCFF017FZE.tabix.bed.gz.tbi | 190.42 KB | f4586f53325b90472fd41771f3f6eba9 |
| ENCFF017FZE.tabix.bed.gz.tbi.dvc | 110.0 B | 7e48cd19df57ee902842a8056b40eb9f |
| genomic_resource.yaml | 1.87 KB | 7cd4aefcdcb3b48df791927aca99aca0 |
| genomic_resource_original.yaml | 1.76 KB | 4bb2170e3768d90c8939aeac3816bf1b |
| statistics/ |