DNase-seq_ENCSR156CLC
DNase-seq ENCSR156CLC [biosample_summary="Homo sapiens brain tissue female embryo (96 days)"]
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| Id: | DNase-seq/ENCSR156CLC |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR156CLC [biosample_summary="Homo sapiens brain tissue female embryo (96 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (96 days) output_type: peaks audit_warning: Alignment file {ENCFF582VOY|/files/ENCFF582VOY/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 44761501 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR156CLC | float |
DNase-seq_ENCSR156CLC |
DNase-seq ENCSR156CLC [biosample_summary="Homo sapiens brain tissue female embryo (96 days)"]
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[0.134, 43.8] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF317LIS.bed.gz | 1.16 MB | b19f15eb2cfcbbbffc3056c14b5ff06e |
| ENCFF317LIS.bed.gz.dvc | 101.0 B | 46bfe68811714236de84a8afedf71bb0 |
| ENCFF317LIS.tabix.bed.gz | 1.04 MB | 4fdabd14bc93bc41e19459fca77c2a1c |
| ENCFF317LIS.tabix.bed.gz.dvc | 107.0 B | 56b95985cd8d45891cead5a50288c683 |
| ENCFF317LIS.tabix.bed.gz.tbi | 521.62 KB | 530dda1c6c30d4cba912acc2a33ef404 |
| ENCFF317LIS.tabix.bed.gz.tbi.dvc | 110.0 B | 8749b80e19e069aec42ee58a5a952d9d |
| genomic_resource.yaml | 1.82 KB | 4367542e1d2ae5285614f2ee6b3768b2 |
| genomic_resource_original.yaml | 1.72 KB | f8cbcdc64a9f59eddcc58c234549c180 |
| statistics/ |