DNase-seq_ENCSR155NPL
DNase-seq ENCSR155NPL [biosample_summary="Homo sapiens renal cortex interstitium tissue male embryo (113 days)"]
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| Id: | DNase-seq/ENCSR155NPL |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR155NPL [biosample_summary="Homo sapiens renal cortex interstitium tissue male embryo (113 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (113 days) output_type: peaks audit_warning: Alignment file {ENCFF378TCX|/files/ENCFF378TCX/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 29197883 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR155NPL | float |
DNase-seq_ENCSR155NPL |
DNase-seq ENCSR155NPL [biosample_summary="Homo sapiens renal cortex interstitium tissue male embryo (113 days)"]
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[0.172, 37] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF849YSM.bed.gz | 748.32 KB | ada922656b95b07e7a7603789796be45 |
| ENCFF849YSM.bed.gz.dvc | 100.0 B | acd35ea83cf7c6cf05dcdff485a1d9ff |
| ENCFF849YSM.tabix.bed.gz | 662.23 KB | b012fcacfb255e460eed23280de78c0a |
| ENCFF849YSM.tabix.bed.gz.dvc | 106.0 B | b759ac7cc9b68d5d3d9664062da0444c |
| ENCFF849YSM.tabix.bed.gz.tbi | 378.22 KB | 5c82212a9527d160d2fc5b84d6497775 |
| ENCFF849YSM.tabix.bed.gz.tbi.dvc | 110.0 B | 1592d4c08f14b9dbfce3388cc240cee9 |
| genomic_resource.yaml | 1.88 KB | c5b14a1a226a75c9fba71c3e2ca42f7f |
| genomic_resource_original.yaml | 1.77 KB | 7feecd0de55f1699b51bfc85cead9d53 |
| statistics/ |