Resource
| Id | DNase-seq/ENCSR141NSQ |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR141NSQ [biosample_summary="Homo sapiens muscle of back tissue male embryo (104 days)"] |
| Description |
status: released biological_replicates: Rep 1 summary: male embryo (104 days) output_type: peaks audit_internal_action: Archived analysis {ENCAN696TUM|/analyses/ENCAN696TUM/} has in progress subobject quality standard {encode3-dnase|/quality-standards/encode3-dnase/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR141NSQ | float |
DNase-seq_ENCSR141NSQ |
DNase-seq ENCSR141NSQ [biosample_summary="Homo sapiens muscle of back tissue male embryo (104 days)"]
|
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[3, 7.74e+03] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 29112594 | 0.90% | 193697 |
| chr1 | 2568208 | 1.03% | 17092 |
| chr2 | 2487544 | 1.03% | 16553 |
| chr3 | 2000196 | 1.01% | 13316 |
| chr4 | 1662851 | 0.87% | 11053 |
| chr5 | 1750600 | 0.96% | 11645 |
| chr6 | 1818959 | 1.06% | 12103 |
| chr7 | 1504196 | 0.94% | 10008 |
| chr8 | 1428513 | 0.98% | 9508 |
| chr9 | 1238130 | 0.89% | 8239 |
| chr10 | 1414759 | 1.06% | 9413 |
| chr11 | 1434291 | 1.06% | 9546 |
| chr12 | 1414980 | 1.06% | 9412 |
| chr13 | 885270 | 0.77% | 5887 |
| chr14 | 918103 | 0.86% | 6109 |
| chr15 | 938257 | 0.92% | 6247 |
| chr16 | 811512 | 0.90% | 5401 |
| chr17 | 1031267 | 1.24% | 6862 |
| chr18 | 722583 | 0.90% | 4796 |
| chr19 | 708281 | 1.21% | 4717 |
| chr20 | 694805 | 1.08% | 4624 |
| chr21 | 363300 | 0.78% | 2416 |
| chr22 | 431550 | 0.85% | 2872 |
| chrX | 843339 | 0.54% | 5604 |
| chrY | 41100 | 0.07% | 274 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 193697 | 6 | 515 | 150.3 | 150 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF397QTB.bed.gz | 1.83 MB | 1e7da4c53a3e5f00261af292e2d90001 |
| ENCFF397QTB.tabix.bed.gz | 1.58 MB | 7542e0de9264e67eb6de354a4222e4b6 |
| ENCFF397QTB.tabix.bed.gz.tbi | 688.72 KB | f1b472f4606d1ea00d3622b5b51eeab8 |
| genomic_resource.yaml | 1.4 KB | 76338300edaa776681e12d2706940074 |
| statistics/ |
