Resource

Id DNase-seq/ENCSR141IUScontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR141IUS [biosample_summary="Homo sapiens lung tissue female embryo (76 days)"]
Description
Labels
  • accession: ENCSR141IUS
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002048/
  • biosample_summary: Homo sapiens lung tissue female embryo (76 days)
  • date_created: 2017-06-26T19:00:46.329710+00:00
  • date_released: 2017-12-13
  • doi: 10.17989/ENCSR141IUS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (76 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR141IUS float

DNase-seq_ENCSR141IUS
DNase-seq ENCSR141IUS [biosample_summary="Homo sapiens lung tissue female embryo (76 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR141IUS [1, 4.45e+04]
n
33,071,127
mean
360
sd
803

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 330711271.03% 220181
chr1 2956675 1.19% 19696
chr2 2767287 1.14% 18425
chr3 1995975 1.01% 13284
chr4 1548257 0.81% 10305
chr5 1803548 0.99% 12004
chr6 1831779 1.07% 12192
chr7 1656506 1.04% 11027
chr8 1484756 1.02% 9881
chr9 1471206 1.06% 9798
chr10 1695382 1.27% 11278
chr11 1808548 1.34% 12048
chr12 1485996 1.11% 9900
chr13 830000 0.73% 5524
chr14 1111682 1.04% 7392
chr15 1099242 1.08% 7316
chr16 1125737 1.25% 7501
chr17 1475114 1.77% 9823
chr18 752565 0.94% 5016
chr19 1080652 1.84% 7195
chr20 964054 1.50% 6418
chr21 493091 1.06% 3281
chr22 714049 1.41% 4752
chrX 898326 0.58% 5987
chrY 20700 0.04% 138
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 220181 3 418 150.2 150
global segment-length histogram

Files

Filename Size md5
ENCFF794QIS.bed.gz 2.13 MB edb6058923f04f878e7784829b59f644
ENCFF794QIS.tabix.bed.gz 1.83 MB da20054ffc6506f127bd59485fe329a7
ENCFF794QIS.tabix.bed.gz.tbi 629.36 KB 4fa9a38e16aba73a78d0bdca5bf356df
genomic_resource.yaml 1.38 KB 8399432adddb1b71bfd7cf43b54aec30
statistics/