DNase-seq_ENCSR134BSY
DNase-seq ENCSR134BSY [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)"]
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| Id: | DNase-seq/ENCSR134BSY |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR134BSY [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (33 years) output_type: peaks audit_warning: Alignment file {ENCFF179HBF|/files/ENCFF179HBF/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 44608316 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR134BSY | float |
DNase-seq_ENCSR134BSY |
DNase-seq ENCSR134BSY [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell female adult (33 years)"]
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[0.18, 47.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF108LUO.bed.gz | 404.62 KB | 20ac13762c9925c26379ba7fd680fdb5 |
| ENCFF108LUO.bed.gz.dvc | 100.0 B | afca523451e02961202a360379162555 |
| ENCFF108LUO.tabix.bed.gz | 368.27 KB | 7fee699df03a64a20c7f33f10f63d6e9 |
| ENCFF108LUO.tabix.bed.gz.dvc | 106.0 B | ae6e96bfda7672dca08ef428a9c01550 |
| ENCFF108LUO.tabix.bed.gz.tbi | 194.17 KB | 3045642ff0b98e2393213e265ca8035c |
| ENCFF108LUO.tabix.bed.gz.tbi.dvc | 110.0 B | bb1bf3deb7123a120612bc4fadb3c88a |
| genomic_resource.yaml | 1.88 KB | 04cd07084db5d1f7ef647b6f0fc695e9 |
| genomic_resource_original.yaml | 1.77 KB | bc967c10524fbe9a34ce98b078b8381d |
| statistics/ |