Resource
| Id | DNase-seq/ENCSR112AKE |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR112AKE [biosample_summary="Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)"] |
| Description |
status: released biological_replicates: Rep 1 summary: female adult (90 or above years) with mild cognitive impairment output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR112AKE | float |
DNase-seq_ENCSR112AKE |
DNase-seq ENCSR112AKE [biosample_summary="Homo sapiens with mild cognitive impairment; posterior cingulate gyrus tissue female adult (90 or above years)"]
|
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[0.118, 23.9] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 8926144 | 0.28% | 47316 |
| chr1 | 871979 | 0.35% | 4608 |
| chr2 | 643606 | 0.27% | 3441 |
| chr3 | 517446 | 0.26% | 2723 |
| chr4 | 350660 | 0.18% | 1860 |
| chr5 | 425175 | 0.23% | 2273 |
| chr6 | 438692 | 0.26% | 2298 |
| chr7 | 431390 | 0.27% | 2328 |
| chr8 | 412445 | 0.28% | 2250 |
| chr9 | 375114 | 0.27% | 1987 |
| chr10 | 427288 | 0.32% | 2301 |
| chr11 | 516908 | 0.38% | 2759 |
| chr12 | 436286 | 0.33% | 2297 |
| chr13 | 162278 | 0.14% | 848 |
| chr14 | 298519 | 0.28% | 1579 |
| chr15 | 278427 | 0.27% | 1480 |
| chr16 | 355487 | 0.39% | 1849 |
| chr17 | 473370 | 0.57% | 2503 |
| chr18 | 150610 | 0.19% | 832 |
| chr19 | 514110 | 0.88% | 2564 |
| chr20 | 270596 | 0.42% | 1475 |
| chr21 | 112067 | 0.24% | 598 |
| chr22 | 259277 | 0.51% | 1407 |
| chrX | 204069 | 0.13% | 1053 |
| chrY | 345 | <0.01% | 3 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 47316 | 2 | 820 | 188.65 | 180 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF093JBS.bed.gz | 520.66 KB | d0631e22cf505903439ba8c65e73d040 |
| ENCFF093JBS.tabix.bed.gz | 472.07 KB | acdb27ad05d71c06a134ad88d707752f |
| ENCFF093JBS.tabix.bed.gz.tbi | 231.03 KB | 5883ae4d1b63713c1e95445a7235a917 |
| genomic_resource.yaml | 1.47 KB | f46f96ee8932a6d92f117fcdd3c88cea |
| statistics/ |
