Resource

Id DNase-seq/ENCSR102RSUcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR102RSU [biosample_summary="Homo sapiens tibial artery tissue male adult (37 years)"]
Description
Labels
  • accession: ENCSR102RSU
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0007610/
  • biosample_summary: Homo sapiens tibial artery tissue male adult (37 years)
  • date_created: 2019-08-18T16:56:38.656264+00:00
  • date_released: 2019-11-08
  • doi: 10.17989/ENCSR102RSU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR102RSU float

DNase-seq_ENCSR102RSU
DNase-seq ENCSR102RSU [biosample_summary="Homo sapiens tibial artery tissue male adult (37 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR102RSU [6, 8.11e+03]
n
9,708,941
mean
107
sd
113

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 97089410.30% 64666
chr1 953974 0.38% 6356
chr2 724038 0.30% 4820
chr3 611890 0.31% 4074
chr4 390788 0.21% 2601
chr5 501961 0.28% 3343
chr6 551814 0.32% 3671
chr7 459145 0.29% 3056
chr8 419753 0.29% 2796
chr9 430774 0.31% 2868
chr10 482968 0.36% 3217
chr11 507177 0.38% 3379
chr12 499300 0.37% 3330
chr13 222047 0.19% 1480
chr14 316762 0.30% 2110
chr15 340151 0.33% 2267
chr16 342192 0.38% 2278
chr17 482719 0.58% 3218
chr18 191337 0.24% 1276
chr19 427148 0.73% 2848
chr20 266393 0.41% 1774
chr21 116400 0.25% 774
chr22 197032 0.39% 1312
chrX 259228 0.17% 1725
chrY 13950 0.02% 93
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 64666 17 300 150.14 150
global segment-length histogram

Files

Filename Size md5
ENCFF620ZPK.bed.gz 649.4 KB 3e9905fe630f2aa709d2550545337c9e
ENCFF620ZPK.tabix.bed.gz 553.08 KB 06e3dd8258bec3acf3f2f7250bf9aa70
ENCFF620ZPK.tabix.bed.gz.tbi 314.12 KB b62f4d66183dcf2c4b7a53f8182fe513
genomic_resource.yaml 1.39 KB cdab04652c659641d7b227afc6709b68
statistics/