Resource

Id DNase-seq/ENCSR101RCLcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR101RCL [biosample_summary="Homo sapiens T-cell male adult (43 years)"]
Description
Labels
  • accession: ENCSR101RCL
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000084/
  • biosample_summary: Homo sapiens T-cell male adult (43 years)
  • date_created: 2022-11-01T18:14:35.910543+00:00
  • date_released: 2023-01-27
  • doi: 10.17989/ENCSR101RCL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (43 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR101RCL float

DNase-seq_ENCSR101RCL

DNase-seq ENCSR101RCL [biosample_summary="Homo sapiens T-cell male adult (43 years)"]
HISTOGRAM FOR DNase-seq_ENCSR101RCL [0.0805, 37.8]
n
12,919,244
mean
3.19
sd
3.93

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 129192440.40% 58132
chr1 1318258 0.53% 5843
chr2 909809 0.38% 4103
chr3 688804 0.35% 3083
chr4 449780 0.24% 2001
chr5 580920 0.32% 2639
chr6 773437 0.45% 3377
chr7 599899 0.38% 2728
chr8 474885 0.33% 2152
chr9 499271 0.36% 2291
chr10 594044 0.44% 2698
chr11 671933 0.50% 3010
chr12 651918 0.49% 2937
chr13 263054 0.23% 1177
chr14 456103 0.43% 2049
chr15 416479 0.41% 1927
chr16 501291 0.55% 2304
chr17 810514 0.97% 3595
chr18 210599 0.26% 964
chr19 811855 1.39% 3557
chr20 359627 0.56% 1674
chr21 159011 0.34% 719
chr22 302542 0.60% 1404
chrX 396061 0.25% 1815
chrY 19150 0.03% 85
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 58132 3 1000 222.24 200
global segment-length histogram

Files

Filename Size md5
ENCFF762IIH.bed.gz 642.37 KB f108b82be927fbe89dc9ac739efc02ab
ENCFF762IIH.tabix.bed.gz 595.08 KB d24a4a0e855594670ff5f6dc820a1325
ENCFF762IIH.tabix.bed.gz.tbi 251.02 KB d481db9554fc31f7fe3070136b8cb725
genomic_resource.yaml 1.18 KB 8b7d817d103a9fa0a67b1d1a79204706
statistics/