DNase-seq_ENCSR097AMI
DNase-seq ENCSR097AMI [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)"]
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| Id: | DNase-seq/ENCSR097AMI |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR097AMI [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (33 years) output_type: peaks audit_warning: Alignment file {ENCFF240NPO|/files/ENCFF240NPO/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 25418644 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR097AMI | float |
DNase-seq_ENCSR097AMI |
DNase-seq ENCSR097AMI [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell female adult (33 years)"]
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[0.316, 51.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF057GMN.bed.gz | 372.11 KB | b263f81b67359b26c07d85109ad7488f |
| ENCFF057GMN.bed.gz.dvc | 100.0 B | 28cc7e979b82696f4190e20f47787ab3 |
| ENCFF057GMN.tabix.bed.gz | 336.45 KB | 7d0e657257d9adb791bd9f0324e9202d |
| ENCFF057GMN.tabix.bed.gz.dvc | 106.0 B | cd4be4846bf7c1520eaa1edd65f16de4 |
| ENCFF057GMN.tabix.bed.gz.tbi | 186.63 KB | a540b2eb687dd9c65b1b2bbe99a79a20 |
| ENCFF057GMN.tabix.bed.gz.tbi.dvc | 110.0 B | defefb2b475cd0e0af5a3f075aace3eb |
| genomic_resource.yaml | 1.88 KB | f23f83316b6cbb45123f4fb2e411e53f |
| genomic_resource_original.yaml | 1.77 KB | 728def83235846239432b2bc914a0f71 |
| statistics/ |