Resource

Id DNase-seq/ENCSR095GWEcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR095GWE [biosample_summary="Homo sapiens stomach tissue male embryo (58 days) and male embryo (76 days)"]
Description
Labels
  • accession: ENCSR095GWE
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000945/
  • biosample_summary: Homo sapiens stomach tissue male embryo (58 days) and male embryo (76 days)
  • date_created: 2014-06-20T23:46:00.073036+00:00
  • date_released: 2016-09-22
  • doi: 10.17989/ENCSR095GWE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: anisogenic
  • simple_biosample_summary: male embryo (76 days) male embryo (58 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR095GWE float

DNase-seq_ENCSR095GWE
DNase-seq ENCSR095GWE [biosample_summary="Homo sapiens stomach tissue male embryo (58 days) and male embryo (76 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR095GWE [4, 2.63e+04]
n
44,293,032
mean
176
sd
261

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 442930321.38% 294286
chr1 4039815 1.62% 26850
chr2 3634179 1.50% 24123
chr3 2840658 1.43% 18884
chr4 2397924 1.26% 15918
chr5 2483331 1.37% 16505
chr6 2632958 1.54% 17477
chr7 2318408 1.45% 15410
chr8 2015032 1.39% 13380
chr9 1852198 1.34% 12318
chr10 2122067 1.59% 14105
chr11 2230659 1.65% 14813
chr12 2138695 1.60% 14211
chr13 1283424 1.12% 8522
chr14 1437998 1.34% 9558
chr15 1398942 1.37% 9300
chr16 1378930 1.53% 9161
chr17 1806339 2.17% 12011
chr18 1041331 1.30% 6915
chr19 1361145 2.32% 9055
chr20 1120261 1.74% 7447
chr21 554818 1.19% 3688
chr22 774470 1.52% 5155
chrX 1358259 0.87% 9009
chrY 71191 0.12% 471
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 294286 1 600 150.51 150
global segment-length histogram

Files

Filename Size md5
ENCFF543NNF.bed.gz 2.78 MB 09cade5f547de3bc05f7c3b677bf19dc
ENCFF543NNF.tabix.bed.gz 2.4 MB ebc7104919e90795551842e1bc261a1e
ENCFF543NNF.tabix.bed.gz.tbi 744.13 KB 815dfc9df88680c8b9812b8a23969822
genomic_resource.yaml 1.5 KB 57281c62ccba3438e2462f314c5cfa52
statistics/