Resource

Id DNase-seq/ENCSR092WMDcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR092WMD [biosample_summary="Homo sapiens left renal cortex interstitium tissue male embryo (105 days)"]
Description
Labels
  • accession: ENCSR092WMD
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0018117/
  • biosample_summary: Homo sapiens left renal cortex interstitium tissue male embryo (105 days)
  • date_created: 2015-09-16T21:42:33.957718+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR092WMD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (105 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR092WMD float

DNase-seq_ENCSR092WMD
DNase-seq ENCSR092WMD [biosample_summary="Homo sapiens left renal cortex interstitium tissue male embryo (105 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR092WMD [0.221, 18.3]
n
9,247,156
mean
2.46
sd
2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 92471560.29% 46736
chr1 834403 0.34% 4225
chr2 732026 0.30% 3697
chr3 617397 0.31% 3089
chr4 488928 0.26% 2452
chr5 520435 0.29% 2617
chr6 572263 0.34% 2845
chr7 470874 0.30% 2423
chr8 415274 0.29% 2109
chr9 378584 0.27% 1974
chr10 436797 0.33% 2188
chr11 470557 0.35% 2376
chr12 474956 0.36% 2396
chr13 248426 0.22% 1246
chr14 309498 0.29% 1542
chr15 309179 0.30% 1562
chr16 283407 0.31% 1456
chr17 366434 0.44% 1858
chr18 200505 0.25% 1052
chr19 413813 0.71% 1953
chr20 221914 0.34% 1183
chr21 98454 0.21% 499
chr22 149374 0.29% 787
chrX 226066 0.14% 1171
chrY 7592 0.01% 36
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 46736 2 1140 197.86 180
global segment-length histogram

Files

Filename Size md5
ENCFF192WAG.bed.gz 484.45 KB d638f2b75d6e32a853e415ea5f56687b
ENCFF192WAG.tabix.bed.gz 437.94 KB a9cf9e5e360b36104ca81e317f8e834a
ENCFF192WAG.tabix.bed.gz.tbi 251.46 KB 9f4b086aa9779f76b0d4f954437066f8
genomic_resource.yaml 1.97 KB d21df788db7964408ed71cb846cebdc3
statistics/