DNase-seq_ENCSR086FTP
DNase-seq ENCSR086FTP [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)"]
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| Id: | DNase-seq/ENCSR086FTP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR086FTP [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (38 years) output_type: peaks audit_warning: Alignment file {ENCFF254EAW|/files/ENCFF254EAW/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 25056186 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR086FTP | float |
DNase-seq_ENCSR086FTP |
DNase-seq ENCSR086FTP [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)"]
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[0.441, 41.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF912AVR.bed.gz | 342.27 KB | 994716cf5552d4198f617b6c2980d2bd |
| ENCFF912AVR.bed.gz.dvc | 100.0 B | 0a2954e0b11e458fe9b4dc45e4d4ec86 |
| ENCFF912AVR.tabix.bed.gz | 306.96 KB | f21bdc2df1ec34dfb637971290e659fa |
| ENCFF912AVR.tabix.bed.gz.dvc | 106.0 B | a454cec01212456365c7f314e414a108 |
| ENCFF912AVR.tabix.bed.gz.tbi | 179.24 KB | 4aafb6d1569bf993629caa5dc942d3ae |
| ENCFF912AVR.tabix.bed.gz.tbi.dvc | 110.0 B | 8c3bf4550fd9a75018bf095bf6561ace |
| genomic_resource.yaml | 1.87 KB | 22c02227a4068a7cd0df46ee11bad4aa |
| genomic_resource_original.yaml | 1.76 KB | 606fa4d2a001295632a37ab4e9f2c05c |
| statistics/ |