DNase-seq_ENCSR072NBR
DNase-seq ENCSR072NBR [biosample_summary="Homo sapiens muscle of back tissue female embryo (98 days)"]
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| Id: | DNase-seq/ENCSR072NBR |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR072NBR [biosample_summary="Homo sapiens muscle of back tissue female embryo (98 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (98 days) output_type: peaks audit_warning: Alignment file {ENCFF525JWX|/files/ENCFF525JWX/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 28508125 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR072NBR | float |
DNase-seq_ENCSR072NBR |
DNase-seq ENCSR072NBR [biosample_summary="Homo sapiens muscle of back tissue female embryo (98 days)"]
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[0.246, 36.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF501AWD.bed.gz | 692.72 KB | a5b2bf3b97e103ec53348717e6fc9b20 |
| ENCFF501AWD.bed.gz.dvc | 100.0 B | 8dc44d2041a283b9bda16e1dd61d6fc7 |
| ENCFF501AWD.tabix.bed.gz | 614.77 KB | 00c423148944f6fa2c3d6837d0f801fe |
| ENCFF501AWD.tabix.bed.gz.dvc | 106.0 B | be0dc7a079b862f3581fa027fb7c02b1 |
| ENCFF501AWD.tabix.bed.gz.tbi | 359.06 KB | 810a82855a9c08fe515b5cc9c97273a9 |
| ENCFF501AWD.tabix.bed.gz.tbi.dvc | 110.0 B | ea99b5816b78f3c0e892bb2be209a39f |
| genomic_resource.yaml | 1.85 KB | 2aac397dbf400564133de05d4a84e8f2 |
| genomic_resource_original.yaml | 1.74 KB | 2d248327d4d2a0531938032c41942d79 |
| statistics/ |