DNase-seq_ENCSR064GBK
DNase-seq ENCSR064GBK [biosample_summary="Homo sapiens heart tissue female embryo (91 days)"]
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| Id: | DNase-seq/ENCSR064GBK |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR064GBK [biosample_summary="Homo sapiens heart tissue female embryo (91 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (91 days) output_type: peaks audit_warning: Alignment file {ENCFF783HYF|/files/ENCFF783HYF/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 36250539 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR064GBK | float |
DNase-seq_ENCSR064GBK |
DNase-seq ENCSR064GBK [biosample_summary="Homo sapiens heart tissue female embryo (91 days)"]
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[0.194, 21.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF302OBA.bed.gz | 831.39 KB | d7bdbf45afc2d16bb3fbb50de1e64e4c |
| ENCFF302OBA.bed.gz.dvc | 100.0 B | c4ef9a013c645f3b11368910888af250 |
| ENCFF302OBA.tabix.bed.gz | 745.46 KB | e7d998da60f60b29a21b4d640ccb0c92 |
| ENCFF302OBA.tabix.bed.gz.dvc | 106.0 B | b8787fe1fee5a06d2bcc3932929fd6ff |
| ENCFF302OBA.tabix.bed.gz.tbi | 390.78 KB | b53dd174809933db110144ccc8bd9e31 |
| ENCFF302OBA.tabix.bed.gz.tbi.dvc | 110.0 B | 9b9ee3dd75bc826a4ff8f21045c1d77b |
| genomic_resource.yaml | 1.82 KB | 5864cd4fb695f9d7776893aef3941ab7 |
| genomic_resource_original.yaml | 1.72 KB | 563d3f2df2d126742cecc656af91bf1f |
| statistics/ |