Resource

Id DNase-seq/ENCSR060BFUcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR060BFU [biosample_summary="Homo sapiens adrenal gland tissue embryo (96 days)"]
Description
Labels
  • accession: ENCSR060BFU
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue embryo (96 days)
  • date_created: 2015-09-16T21:43:00.812972+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR060BFU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: embryo (96 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR060BFU float

DNase-seq_ENCSR060BFU
DNase-seq ENCSR060BFU [biosample_summary="Homo sapiens adrenal gland tissue embryo (96 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR060BFU [0.212, 28]
n
14,005,824
mean
2.72
sd
3.03

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 140058240.44% 81552
chr1 1280353 0.51% 7424
chr2 1107686 0.46% 6512
chr3 922548 0.47% 5418
chr4 723281 0.38% 4255
chr5 781796 0.43% 4574
chr6 823303 0.48% 4755
chr7 740458 0.46% 4317
chr8 658119 0.45% 3876
chr9 569965 0.41% 3351
chr10 673304 0.50% 3973
chr11 718547 0.53% 4180
chr12 693395 0.52% 4027
chr13 397039 0.35% 2313
chr14 469760 0.44% 2703
chr15 439802 0.43% 2563
chr16 454039 0.50% 2634
chr17 547870 0.66% 3150
chr18 324257 0.40% 1921
chr19 544585 0.93% 2929
chr20 367304 0.57% 2154
chr21 164547 0.35% 966
chr22 237481 0.47% 1389
chrX 349086 0.22% 2066
chrY 17299 0.03% 102
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 81552 6 700 171.74 171
global segment-length histogram

Files

Filename Size md5
ENCFF949ZRW.bed.gz 868.61 KB e59989966f3e8e4b0b1aff9eb15b12dd
ENCFF949ZRW.tabix.bed.gz 773.25 KB f62fe2786fb66f8745a50c96845cee16
ENCFF949ZRW.tabix.bed.gz.tbi 428.52 KB 22a9c5850449b6c62a245b1b54b29c1d
genomic_resource.yaml 1.81 KB 693049556d848ef492f4b4ade188e0a1
statistics/