DNase-seq_ENCSR060BFU
DNase-seq ENCSR060BFU [biosample_summary="Homo sapiens adrenal gland tissue embryo (96 days)"]
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| Id: | DNase-seq/ENCSR060BFU |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR060BFU [biosample_summary="Homo sapiens adrenal gland tissue embryo (96 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: embryo (96 days) output_type: peaks audit_warning: Alignment file {ENCFF073UNC|/files/ENCFF073UNC/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 37850069 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR060BFU | float |
DNase-seq_ENCSR060BFU |
DNase-seq ENCSR060BFU [biosample_summary="Homo sapiens adrenal gland tissue embryo (96 days)"]
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[0.212, 28] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF949ZRW.bed.gz | 868.61 KB | e59989966f3e8e4b0b1aff9eb15b12dd |
| ENCFF949ZRW.bed.gz.dvc | 100.0 B | 228c5b4d1e49007406c49893a0676065 |
| ENCFF949ZRW.tabix.bed.gz | 773.25 KB | f62fe2786fb66f8745a50c96845cee16 |
| ENCFF949ZRW.tabix.bed.gz.dvc | 106.0 B | 374a65d212ed9be8dedf611068f33266 |
| ENCFF949ZRW.tabix.bed.gz.tbi | 428.52 KB | 22a9c5850449b6c62a245b1b54b29c1d |
| ENCFF949ZRW.tabix.bed.gz.tbi.dvc | 110.0 B | 8aacf19f6b3c2e57e19760d0860f2be7 |
| genomic_resource.yaml | 1.81 KB | 693049556d848ef492f4b4ade188e0a1 |
| genomic_resource_original.yaml | 1.71 KB | 276ffd1f0022f67ab850af32c4929579 |
| statistics/ |