Resource

Id DNase-seq/ENCSR059ETScontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR059ETS [biosample_summary="Homo sapiens posterior cingulate gyrus tissue female adult (85 years)"]
Description
Labels
  • accession: ENCSR059ETS
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002740/
  • biosample_summary: Homo sapiens posterior cingulate gyrus tissue female adult (85 years)
  • date_created: 2021-08-23T17:03:31.363706+00:00
  • date_released: 2021-08-31
  • doi: 10.17989/ENCSR059ETS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (85 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR059ETS float

DNase-seq_ENCSR059ETS
DNase-seq ENCSR059ETS [biosample_summary="Homo sapiens posterior cingulate gyrus tissue female adult (85 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR059ETS [0.0252, 30]
n
84,963,294
mean
0.628
sd
1.43

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 849632942.64% 459669
chr1 7823544 3.14% 42161
chr2 6164497 2.55% 33480
chr3 3970143 2.00% 22230
chr4 2966314 1.56% 16537
chr5 3500555 1.93% 19609
chr6 3283897 1.92% 18596
chr7 4660260 2.92% 25168
chr8 3329961 2.29% 18074
chr9 3670596 2.65% 19644
chr10 4286836 3.20% 23108
chr11 5060772 3.75% 26501
chr12 3841887 2.88% 21064
chr13 1523210 1.33% 8734
chr14 2791220 2.61% 14961
chr15 2808425 2.75% 15275
chr16 4275419 4.73% 22802
chr17 5659547 6.80% 29904
chr18 1434365 1.78% 8148
chr19 3819017 6.52% 19997
chr20 3114013 4.83% 16428
chr21 1409342 3.02% 7348
chr22 3547341 6.98% 18097
chrX 2015858 1.29% 11744
chrY 6275 0.01% 59
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 459669 1 1020 184.84 180
global segment-length histogram

Files

Filename Size md5
ENCFF124CVB.bed.gz 4.46 MB b148d107ee9b1521147cd1f0b7cff41f
ENCFF124CVB.tabix.bed.gz 4.15 MB 3bc66ad83092015c3b17da86329f203b
ENCFF124CVB.tabix.bed.gz.tbi 587.79 KB 48acb8df46aee61205db9cd6d2a9a2ce
genomic_resource.yaml 1.27 KB e5af6c9ac64b2898e3b937f60086ef59
statistics/