Resource

Id	DNase-seq/ENCSR042DVUcontent_copy
Type	position_score
Version	0
Summary	DNase-seq ENCSR042DVU [biosample_summary="Homo sapiens with Alzheimer''s disease; head of caudate nucleus tissue female adult (74 years)"]
Description
Labels	accession: ENCSR042DVU assay_term_name: DNase-seq biosample_ontology: /biosample-types/tissue_UBERON_0002626/ biosample_summary: Homo sapiens with Alzheimer's disease; head of caudate nucleus tissue female adult (74 years) date_created: 2021-08-23T17:03:31.057809+00:00 date_released: 2021-08-31 doi: 10.17989/ENCSR042DVU perturbed: False reference_genome: hg38/genomes/GRCh38-hg38 replication_type: unreplicated simple_biosample_summary: female adult (74 years) with Alzheimer's disease status: released submitter_comment:

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
DNase-seq_ENCSR042DVU	float	DNase-seq_ENCSR042DVU	DNase-seq ENCSR042DVU [biosample_summary="Homo sapiens with Alzheimer''s disease; head of caudate nucleus tissue female adult (74 years)"]		[0.0529, 35.3]	n 18,886,807 mean 2.48 sd 3.28

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	18886807	0.59%	106392
chr1	1803889	0.72%	10051
chr2	1451533	0.60%	8293
chr3	1125242	0.57%	6414
chr4	841472	0.44%	4764
chr5	970450	0.53%	5500
chr6	1019075	0.60%	5756
chr7	939210	0.59%	5333
chr8	864950	0.60%	4940
chr9	839659	0.61%	4753
chr10	932343	0.70%	5243
chr11	1053620	0.78%	5888
chr12	921656	0.69%	5144
chr13	439184	0.38%	2498
chr14	632752	0.59%	3542
chr15	600016	0.59%	3410
chr16	696921	0.77%	3923
chr17	918875	1.10%	5105
chr18	401797	0.50%	2308
chr19	790269	1.35%	4202
chr20	546581	0.85%	3122
chr21	228051	0.49%	1307
chr22	421189	0.83%	2339
chrX	447511	0.29%	2552
chrY	562	<0.01%	5
3342 contigs with no values (129077085 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	106392	2	740	177.52	180