Resource

Id DNase-seq/ENCSR036ELYcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR036ELY [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)"]
Description
Labels
  • accession: ENCSR036ELY
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000624/
  • biosample_summary: Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)
  • date_created: 2020-04-20T23:45:41.546858+00:00
  • date_released: 2020-10-05
  • doi: 10.17989/ENCSR036ELY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (42 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR036ELY float

DNase-seq_ENCSR036ELY
DNase-seq ENCSR036ELY [biosample_summary="Homo sapiens CD4-positive, alpha-beta T cell male adult (42 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR036ELY [0.191, 57.6]
n
8,145,463
mean
6.15
sd
6.48

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 81454630.25% 42952
chr1 832502 0.33% 4352
chr2 555431 0.23% 2918
chr3 432506 0.22% 2282
chr4 265715 0.14% 1414
chr5 355497 0.20% 1902
chr6 463761 0.27% 2441
chr7 364848 0.23% 1960
chr8 300220 0.21% 1604
chr9 330288 0.24% 1727
chr10 353885 0.26% 1878
chr11 420490 0.31% 2213
chr12 417861 0.31% 2199
chr13 159980 0.14% 823
chr14 289699 0.27% 1510
chr15 267345 0.26% 1417
chr16 341661 0.38% 1811
chr17 517700 0.62% 2735
chr18 122414 0.15% 647
chr19 567260 0.97% 2915
chr20 233156 0.36% 1268
chr21 95053 0.20% 505
chr22 204961 0.40% 1092
chrX 244363 0.16% 1294
chrY 8867 0.02% 45
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 42952 6 840 189.64 180
global segment-length histogram

Files

Filename Size md5
ENCFF819SBW.bed.gz 478.53 KB add24708801b98b1e7e2ac88656a870a
ENCFF819SBW.tabix.bed.gz 435.31 KB ba04a40580db97932bfd840a7e177eca
ENCFF819SBW.tabix.bed.gz.tbi 210.88 KB 24750a44353c2e3a5f82b7a35bf080df
genomic_resource.yaml 1.26 KB 84fcdcbc9416d21f78e828f2ebfc4106
statistics/