DNase-seq_ENCSR025EYJ
DNase-seq ENCSR025EYJ [biosample_summary="Homo sapiens T-cell male adult (48 years)"]
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| Id: | DNase-seq/ENCSR025EYJ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR025EYJ [biosample_summary="Homo sapiens T-cell male adult (48 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (48 years) output_type: peaks audit_warning: Alignment file {ENCFF377MQA|/files/ENCFF377MQA/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 43984566 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR025EYJ | float |
DNase-seq_ENCSR025EYJ |
DNase-seq ENCSR025EYJ [biosample_summary="Homo sapiens T-cell male adult (48 years)"]
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[0.182, 54.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF022CDR.bed.gz | 445.58 KB | 4eebff15c4b5f4c649fcdf9b2ead9b1c |
| ENCFF022CDR.bed.gz.dvc | 100.0 B | 54e06771af93a4a4a61f7aa22f73d246 |
| ENCFF022CDR.tabix.bed.gz | 407.04 KB | 47303d1e027a200991893e2187a7c3a8 |
| ENCFF022CDR.tabix.bed.gz.dvc | 106.0 B | ad53c5ef12daabd1e052cf8e6d9b605b |
| ENCFF022CDR.tabix.bed.gz.tbi | 205.69 KB | 8424fb94d30a8d0f1457ce76ee904c71 |
| ENCFF022CDR.tabix.bed.gz.tbi.dvc | 110.0 B | 5af0608db175a70fe90582a80f8c6dbb |
| genomic_resource.yaml | 1.79 KB | 3c2681db01676f3af9c785bad40c68da |
| genomic_resource_original.yaml | 1.7 KB | 1ea01e52ae5eefac7ccd5833c6867d95 |
| statistics/ |