DNase-seq_ENCSR010ZMK
DNase-seq ENCSR010ZMK [biosample_summary="Homo sapiens muscle of back tissue female embryo (113 days)"]
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| Id: | DNase-seq/ENCSR010ZMK |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR010ZMK [biosample_summary="Homo sapiens muscle of back tissue female embryo (113 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (113 days) output_type: peaks audit_warning: Alignment file {ENCFF128SBY|/files/ENCFF128SBY/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 34802757 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR010ZMK | float |
DNase-seq_ENCSR010ZMK |
DNase-seq ENCSR010ZMK [biosample_summary="Homo sapiens muscle of back tissue female embryo (113 days)"]
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[0.173, 22.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF746PGG.bed.gz | 720.01 KB | eb19ac364de8abe5aa497c7d6a28e7fc |
| ENCFF746PGG.bed.gz.dvc | 100.0 B | b2c22dace5f45dd4fdbd41a190e4d711 |
| ENCFF746PGG.tabix.bed.gz | 643.69 KB | 986b9e02fee84ec260d9eb0e091c91b3 |
| ENCFF746PGG.tabix.bed.gz.dvc | 106.0 B | 47bc8520b16003c3efe465378df3fda0 |
| ENCFF746PGG.tabix.bed.gz.tbi | 355.67 KB | b7b2a13fa03a4121535c7483a1af4faa |
| ENCFF746PGG.tabix.bed.gz.tbi.dvc | 110.0 B | 2adda4ef00bca4c4cb7bc13c2d6f5ffb |
| genomic_resource.yaml | 1.85 KB | 4c2dc75a136b9f69085dbe9667c4ad21 |
| genomic_resource_original.yaml | 1.75 KB | 4b1f56b29e74a32612c29ac57315fbd6 |
| statistics/ |